"ESPSearch: A Program for Finding Exact Sequences and Patterns in DNA, RNA, or Protein." TJ Watt, DF Doyle. Biotechniques 2005, 38, 109-115.|
"Creation and discovery of ligand-receptor pairs for transcriptional control with small molecules." LJ Schwimmer, P Rohatgi, B Azizi, KL Seley, DF Doyle. PNAS 2004, 101, 14707-14712.
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"Chemical complementation: small-molecule based genetic selection in yeast." B Azizi, EI Chang, DF Doyle. Biochemical and Biophysical Research Communications 2003, 306, 774-780.
"Searching for quantitative entropy-enthalpy compensation among protein variants." JR Beasley, DF Doyle, L Chen, DS Cohen, BR Fine, GJ Pielak. Proteins: Structure, Function, and Genetics 2002, 49, 398-402.
"Gas phase activity of anti-FITC antibodies on a surface acoustic wave resonator device." DD Stubbs, WD Hunt, SH Lee, DF Doyle. Biosenors and Bioelectronics 2002, 17, 471-477.
"Engineering orthogonal ligand-receptor pairs from 'near drugs'." DF Doyle, DA Braasch, LK Jackson, HA Weiss, MF Boehm, DJ Mangelsdorf, DR Corey. Journal of the American Chemical Society 2001, 123, 11367-11371.
"Inhibition of gene expression inside cells by peptide nucleic acids: effect of mRNA target sequence, mismatched bases, and PNA length." DF Doyle, DA Braasch, CS Simmons, BA Janowski, DR Corey. Biochemistry 2001, 40, 53-64.
"Modifying ligand specificity of gene regulatory proteins." DF Doyle, DJ Mangelsdorf, DR Corey. Current Opinion in Chemical Biology 2000, 4, 60-64.
"Engineering proteins: keeping up with biology." DF Doyle, DR Corey. Chemistry & Biology 1998, 5, R157-R160.
"Engineering novel specificities for ligand-activated transcription in the nuclear hormone receptor RXR." DJ Peet, DF Doyle, DR Corey, DJ Mangelsdorf. Chemistry & Biology, 1998, 5, 13-21.