Publications

Found 121 results
2012
S. S. Athavale, J Gossett, J., Hsiao, C., Bowman, J. C., O'Neill, E., Hershkovitz, E., Preeprem, T., Hud, N. V., Wartell, R. M., Harvey, S. C., and Williams, L. Dean, Domain III of the T. thermophilus 23S rRNA folds independently to a near-native state., RNA, vol. 18, no. 4, pp. 752-8, 2012.
F. M. Lannan, Mamajanov, I., and Hud, N. V., Human telomere sequence DNA in water-free and high-viscosity solvents: G-quadruplex folding governed by Kramers rate theory., J Am Chem Soc, vol. 134, no. 37, pp. 15324-30, 2012.
A. E. Engelhart, Cafferty, B. J., C Okafor, D., Chen, M. C., Williams, L. Dean, Lynn, D. G., and Hud, N. V., Nonenzymatic ligation of DNA with a reversible step and a final linkage that can be used in PCR., ChemBioChem, vol. 13, no. 8, pp. 1121-4, 2012.
S. S. Athavale, Petrov, A. S., Hsiao, C., Watkins, D., Prickett, C. D., J Gossett, J., Lie, L., Bowman, J. C., O'Neill, E., Bernier, C. R., Hud, N. V., Wartell, R. M., Harvey, S. C., and Williams, L. Dean, RNA folding and catalysis mediated by iron (II)., PLoS One, vol. 7, no. 5, p. e38024, 2012.
A. S. Petrov, Bernier, C. R., Hsiao, C., C Okafor, D., Tannenbaum, E., Stern, J., Gaucher, E., Schneider, D., Hud, N. V., Harvey, S. C., and Williams, L. Dean, RNA-magnesium-protein interactions in large ribosomal subunit., J Phys Chem B, vol. 116, no. 28, pp. 8113-20, 2012.
S. Imari Walker, Grover, M. A., and Hud, N. V., Universal sequence replication, reversible polymerization and early functional biopolymers: a model for the initiation of prebiotic sequence evolution., PLoS One, vol. 7, no. 4, p. e34166, 2012.
2009
Y. Sheng, Bean, H. D., Mamajanov, I., Hud, N. V., and Leszczynski, J., Comprehensive investigation of the energetics of pyrimidine nucleoside formation in a model prebiotic reaction., J Am Chem Soc, vol. 131, no. 44, pp. 16088-95, 2009.
A. G. Tsai, Engelhart, A. E., Hatmal, M. 'monM., Houston, S. I., Hud, N. V., Haworth, I. S., and Lieber, M. R., Conformational variants of duplex DNA correlated with cytosine-rich chromosomal fragile sites., J Biol Chem, vol. 284, no. 11, pp. 7157-64, 2009.
A. E. Engelhart, Morton, T. Hellman, and Hud, N. V., Evidence of strong hydrogen bonding by 8-aminoguanine., Chem Commun (Camb), no. 6, pp. 647-9, 2009.
T. Sarkar, Petrov, A. S., Vitko, J. R., Santai, C. T., Harvey, S. C., Mukerji, I., and Hud, N. V., Integration host factor (IHF) dictates the structure of polyamine-DNA condensates: implications for the role of IHF in the compaction of bacterial chromatin., Biochemistry, vol. 48, no. 4, pp. 667-75, 2009.
N. V. Hud, Mineral surfaces: a mixed blessing for the RNA world?, Astrobiology, vol. 9, no. 2, pp. 253-5; discussion 256, 2009.
I. Suk Joung, Cetinkol, O. Persil, Hud, N. V., and Cheatham, T. E., Molecular dynamics simulations and coupled nucleotide substitution experiments indicate the nature of A{middle dot}A base pairing and a putative structure of the coralyne-induced homo-adenine duplex., Nucleic Acids Res, vol. 37, no. 22, pp. 7715-27, 2009.
O. Persil Cetinkol and Hud, N. V., Molecular recognition of poly(A) by small ligands: an alternative method of analysis reveals nanomolar, cooperative and shape-selective binding., Nucleic Acids Res, vol. 37, no. 2, pp. 611-21, 2009.
E. D. Horowitz, Lilavivat, S., Holladay, B. W., Germann, M. W., and Hud, N. V., Solution structure and thermodynamics of 2',5' RNA intercalation., J Am Chem Soc, vol. 131, no. 16, pp. 5831-8, 2009.

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